Gene detail

Detailed information of HOLI00014.G10666 in Hydra oligactis

Genomic Location: HOLI00014:1616996...1618609
NR annotation: WP_105262651.1, sensor domain-containing diguanylate cyclase [Rhodoferax sp. TS-BS-61-7]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9HYT3	Cyclic di-GMP phosphodiesterase NbdA OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=nbdA PE=1 SV=1
Q8EGF8	Diguanylate cyclase DgcS OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=dgcS PE=1 SV=1
Q8X8Q3	Diguanylate cyclase DgcM OS=Escherichia coli O157:H7 OX=83334 GN=dgcM PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13426	PAS_9	PAS domain	Domain	Interproscan
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR035965	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR000160	Domain	GGDEF domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000014	Domain	PAS domain	Interproscan
IPR052163	Family	Diguanylate Cyclase/Regulatory Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46663	DIGUANYLATE CYCLASE DGCT-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
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