Gene detail

Detailed information of HOLI00014.G9338 in Hydra oligactis

Genomic Location: HOLI00014:94612...96072
NR annotation: WP_105261453.1, PLP-dependent aminotransferase family protein [Rhodoferax sp. TS-BS-61-7]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q796Q6	Uncharacterized HTH-type transcriptional regulator YisV OS=Bacillus subtilis (strain 168) OX=224308 GN=yisV PE=3 SV=1
H3ZPL1	Aromatic-amino-acid aminotransferase 1 OS=Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C) OX=523849 GN=OCC_04335 PE=1 SV=1
Q795M6	Putative aminotransferase YugH OS=Bacillus subtilis (strain 168) OX=224308 GN=yugH PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF00392	GntR	Bacterial regulatory proteins, gntR family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR000524	Domain	Transcription regulator HTH, GntR	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR051446	Family	HTH-type transcriptional regulator with aminotransferase domain	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46577	HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan