Gene detail

Detailed information of HOLI00014.G9373 in Hydra oligactis

Genomic Location: HOLI00014:139818...140144
NR annotation: WP_057674553.1, MULTISPECIES: 50S ribosomal protein L11 [Comamonadaceae]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A9BR94	Large ribosomal subunit protein uL11 OS=Delftia acidovorans (strain DSM 14801 / SPH-1) OX=398578 GN=rplK PE=3 SV=1
C5CKE9	Large ribosomal subunit protein uL11 OS=Variovorax paradoxus (strain S110) OX=543728 GN=rplK PE=3 SV=1
B9MH51	Large ribosomal subunit protein uL11 OS=Acidovorax ebreus (strain TPSY) OX=535289 GN=rplK PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00298	Ribosomal_L11	Ribosomal protein L11, RNA binding domain	Domain	Interproscan
PF03946	Ribosomal_L11_N	Ribosomal protein L11, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000911	Family	Ribosomal protein uL11	Interproscan
IPR036769	Homologous_superfamily	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Interproscan
IPR020783	Domain	Large ribosomal subunit protein uL11, C-terminal	Interproscan
IPR006519	Family	Large ribosomal subunit protein uL11, bacterial-type	Interproscan
IPR036796	Homologous_superfamily	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Interproscan
IPR020784	Domain	Large ribosomal subunit protein uL11, N-terminal	Interproscan
IPR020785	Conserved_site	Large ribosomal subunit protein uL11, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11661	60S RIBOSOMAL PROTEIN L12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015934	Cellular Component	large ribosomal subunit	Interproscan
GO:0070180	Molecular Function	large ribosomal subunit rRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02867	RP-L11, MRPL11, rplK; large subunit ribosomal protein L11	-	Ribosome	ko03011	deepkoala