Detailed information of HOLI00014.G9587 in Hydra oligactis

Genomic Location: HOLI00014:380914...381630
NR annotation: WP_105261754.1, response regulator transcription factor [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0QTK2DNA-binding response regulator MtrA OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=mtrA PE=1 SV=1
Q93CB8DNA-binding response regulator MtrA OS=Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) OX=262316 GN=mtrA PE=3 SV=2
P0A5Z5DNA-binding response regulator MtrA OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=mtrA PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR016032Homologous_superfamilySignal transduction response regulator, C-terminal effectorInterproscan
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan

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