Detailed information of HOLI00019.G41983 in Hydra oligactis

Genomic Location: HOLI00019:139417...183457
NR annotation: XP_047130511.1, protein capicua homolog [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q71UM5Ribosomal protein eS27-like OS=Homo sapiens OX=9606 GN=RPS27L PE=1 SV=3
Q6ZWY3Small ribosomal subunit protein eS27-like OS=Mus musculus OX=10090 GN=Rps27l PE=1 SV=3
P24051Small ribosomal subunit protein eS27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01667Ribosomal_S27eRibosomal protein S27FamilyInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF16090DUF4819Domain of unknown function (DUF4819)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000592FamilySmall ribosomal subunit protein eS27Interproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR052412FamilyCell Cycle and Developmental Transcription RegulatorsInterproscan
IPR032147DomainDomain of unknown function DUF4819Interproscan
IPR011332Homologous_superfamilyZinc-binding ribosomal proteinInterproscan
IPR023407Homologous_superfamilySmall ribosomal subunit protein eS27, zinc-binding domain superfamilyInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13059HMG-BOX TRANSCRIPTION FACTOR BBXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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