Detailed information of HOLI00019.G41996 in Hydra oligactis

Genomic Location: HOLI00019:674484...714371
NR annotation: XP_002171218.2, RNA 3'-terminal phosphate cyclase-like protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y2P8RNA 3'-terminal phosphate cyclase-like protein OS=Homo sapiens OX=9606 GN=RCL1 PE=1 SV=3
Q2KHX8RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus OX=9913 GN=RCL1 PE=2 SV=1
Q9JJT0RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus OX=10090 GN=Rcl1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF01137RTCRNA 3'-terminal phosphate cyclaseDomainInterproscan
PF05189RTC_insertRNA 3'-terminal phosphate cyclase (RTC), insert domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR016443FamilyRNA 3'-terminal phosphate cyclase type 2Interproscan
IPR013792Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan
IPR037136Homologous_superfamilyRNA 3'-terminal phosphate cyclase domain superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036553Homologous_superfamilyRNA 3'-terminal phosphate cyclase, insert domain superfamilyInterproscan
IPR020719Conserved_siteRNA 3'-terminal phosphate cyclase-like, conserved siteInterproscan
IPR000228FamilyRNA 3'-terminal phosphate cyclaseInterproscan
IPR023797DomainRNA 3'-terminal phosphate cyclase domainInterproscan
IPR013791DomainRNA 3'-terminal phosphate cyclase, insert domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11096RNA 3' TERMINAL PHOSPHATE CYCLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000479Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

TOP