Gene detail

Detailed information of HOLI00039.G13732 in Hydra oligactis

Genomic Location: HOLI00039:63819...135424
NR annotation: XP_012554965.1, uncharacterized protein LOC101238206 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00039.g13732.t1

ATGGAAAAATACAGAGTGCTGATCATATTGCAACTTTTCTTAGTTCCGTCATGTTCTCCTGGTACGTGGGTTAATTTGACAATTACTTACAGTTCTGTGGCTTCTAATGAAATAATCATTTTGCAAAATGCTCTTGAAGAAAATAATGCAATCGATACCATGAAAGTGGGACAATACAACATGACTACTAGTGATGTTCCACCTCCTCCATCTAATTTCACTGCAAAAGCTATTTCACTTGATAAAATAAATACATCATGGACACCTGTAAATTTCACAGTTGATGGTAATCTAACTGTTCAAGGCTATACCGTTTTCTACAGAGTATACCGAGATCCTGATTCCCAATGGGAGTGGATTTCATGTCTGGAGAACACAACTTATTTGGTCATAGAAAGGTTAGCTCCATATACAACTTATGTATTGCGAGTTCTAGCTTTTCATCAAATGGGAAATGGAATAAGTTCTGGTCCATTTGTTGAAAGAACATTTGAAGGAATACCTACTGAAAAACCCAATTTGACATGTACACCCGATTCATCAAGCAGTGTTACTCTGTATTGGAGTCGTGTAATGGAATGGAGAGGATTTAAACGAAGTTATACAGCACTTTATAGATTTTTTGGAGTAAATGAATCCTTAAATAATGTAACATTTAACACTAATGATGTATCAGGAAAGATTTTTAATTTGAAAGTCTATACTAAATATGAGTTGTACCTCACTGCAGACACTAACGCTGGATCAGGGCCTGAGGCCTGGTGTGTTTTCACCACTTTTGGAACAGTTCCATCGATTGGTCCTTCTATAACTGGTTGGTATCTAGATCAGTATCGTCCAAGTGAGGCTGTCATGAGATGGGATCCAATACCTGATAATTATACTAATGGAAAATTGATTAGTTATAAAATTTCATATGGAATATCTCGAGATGGAAAAATATATGTTCCTCTTCAAATGACTGATGTTCGGAGTATACTGTATACGTTTCTGGCTGAAACCATCATGGGAGCAGGCAATAAGAGTAAACCAATATATATTGAATCATGCAAGTGTCCCAATAATATCTATACTGCATGGTACAAAGACAATGATAAATCTTTAATTTATGGTGATAATTATAACATTACCGGAGGTATAATGTATGATTTTTTAAAAGCAATGACAGCCTCAGTATGCTCTAGTTGTCCTGGTTTAAAATCTGGGGTATCATACAATCTTTATTGGGACAGAACAAAAGACGGACATTCACCTCAACGATCAAATCATGATGAGTTGAAAAAACTTCTTGATAACAACGTACACTTTAGTTTACCAATCAACGGTAAAGCGTCGGTTGAAACATTGCAATCAAAATTTAAGTATGTTCAGATTGTATCTTCTCCAGGTGTTGCATTTATAGTAAGAGATTCTTCTGCAGATTTTAACAAGTCAAAAGCAGTTGCTGCTGCCATTTTCAATTGTTGGCCTGCTGTAATAATAATATTTCTTTTCTCAACTATCAGTGGAACATTTATGTGGATTCTGGATCGTAAAATTAATAAAATAGAATTTCCAAACGAAAGTTTTGTTCGTGGTATTCTTCATGGCACATACTGGGCATTTGTCAGTATGACCACTATTGGGTATGGGGACAAGACTCCACGAAGTACGCCAGCAAAAATTGCTGCTATAATTTGGTTGATAACAGGTCCTATTACGAATGCCATTGTTATTGGTGCTATAACTACTAACCTTACTTCTGTGAAATTGAGTCCCGATCCAATTCTCTATGGTAACAAGATAGGTGCTATTAATAACTCATGTGATTATGCATTAGGAGTTCGGAGAAATGCTAAAATGGATACTACAGGTTATGCGTTCACAGACGTAGATAGCTTATTAAATGCACTTGAATCTAAAGTTTTGGATGGCATCTTATTGGATTCACTTAAAGTTGTTTCAGTAGTGGGGACCTTTCAACAGCGGAATTTTAAGGTTGTGAAAATAATACCAGAGCATTGTGGTTGGGGAGTTGTTCTTTCTTCTGATATAATTAAAGTGGAAGAAGAAATACGCTCATATGTAAAGGCGCAAGCACAGATGATGAAGAATCTCGTAGAAAACCTAACTAAGTCCATACACGTACAGGTTGGAGGTAATAATAAAGTTCATACTTTGGACACAGGATTGATTGACCCAAAATCAAAAATATCACAAGGAATATATTACTATGGATCAGTTATCATTTTATGTGCAATTGTTATAGGGTTTTCCCTTGAAGTTGCACTTGGAAGGCTAAAGAAACAGAAGCTTCACCCATACAGTCAAAATGAATCATTGGAAGTAAAGTTGTCAAAATGTGTGCGCAAGTTTTGTAACCATCTGCGGATTAGTATAGAGGTGCAAATTCAGAAGGACGAAGCTGAGATAACTGCATTCTTCCAACAGAAAGGATATTCACTCGGTTTGGGCTGGGTACGTTACTTAACAGAAGACGAAGAGATACTTAAAAAACAAATGAAATATCAAGAAATTATGAGCATTGATTTGGGCGAATCAAAGAGCGATTTCAATGTCTGGTCGAAACTGAAAGATGGAGCACGAGTTCTCCATCGCAAAGAATATAACATTTTATAA

Transcript

HOLI00039.g13732.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF07885	Ion_trans_2	Ion channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR013099	Domain	Potassium channel domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11537	VOLTAGE-GATED POTASSIUM CHANNEL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005249	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0005251	Molecular Function	delayed rectifier potassium channel activity	Interproscan
GO:0008076	Cellular Component	voltage-gated potassium channel complex	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0071805	Biological Process	potassium ion transmembrane transport	Interproscan