Detailed information of HOLI00059.G25557 in Hydra oligactis

Genomic Location: HOLI00059:40530...43234
NR annotation: WP_105261363.1, AMP-binding protein [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0K844Sulfoacetate--CoA ligase OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=sauT PE=2 SV=1
B4EY25Crotonobetaine/carnitine--CoA ligase OS=Proteus mirabilis (strain HI4320) OX=529507 GN=caiC PE=3 SV=1
Q8GB18Crotonobetaine/carnitine--CoA ligase OS=Proteus sp. (strain LE138) OX=217617 GN=caiC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12625Arabinose_bdArabinose-binding domain of AraC transcription regulator, N-termDomainInterproscan
PF13193AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF12833HTH_18Helix-turn-helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032687DomainHTH-type transcriptional regulator AraC-type, N-terminalInterproscan
IPR045851Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR025110DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR020845Conserved_siteAMP-binding, conserved siteInterproscan
IPR018060DomainDNA binding HTH domain, AraC-typeInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43201ACYL-COA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0006631Biological Processfatty acid metabolic processInterproscan
GO:0031956Molecular Functionmedium-chain fatty acid-CoA ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01897ACSL, fadD; long-chain acyl-CoA synthetaseEC:6.2.1.3
Exosomeko04147deepkoala

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