Gene detail

Detailed information of HOLI00059.G25935 in Hydra oligactis

Genomic Location: HOLI00059:439962...441053
NR annotation: WP_105260145.1, iron-sulfur cluster carrier protein ApbC [Rhodoferax sp. TS-BS-61-7]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P72190	Iron-sulfur cluster carrier protein OS=Pseudomonas fragi OX=296 PE=3 SV=1
P0AF09	Iron-sulfur cluster carrier protein OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mrp PE=3 SV=1
P0AF08	Iron-sulfur cluster carrier protein OS=Escherichia coli (strain K12) OX=83333 GN=mrp PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01883	FeS_assembly_P	Iron-sulfur cluster assembly protein	Domain	Interproscan
PF10609	ParA	NUBPL iron-transfer P-loop NTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034904	Homologous_superfamily	Fe-S cluster assembly domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR044304	Family	Iron-sulfur protein NUBPL-like	Interproscan
IPR000808	Conserved_site	Iron-sulfur cluster carrier protein-like, conserved site	Interproscan
IPR002744	Domain	MIP18 family-like	Interproscan
IPR019591	Family	Mrp/NBP35 ATP-binding protein	Interproscan
IPR033756	Family	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42961	IRON-SULFUR PROTEIN NUBPL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016226	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0140663	Molecular Function	ATP-dependent FeS chaperone activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03593	mrp, NUBPL; ATP-binding protein involved in chromosome partitioning	-	Mitochondrial biogenesis	ko03029	deepkoala