Detailed information of HOLI00059.G25949 in Hydra oligactis

Genomic Location: HOLI00059:458437...459753
NR annotation: WP_105260128.1, serine--tRNA ligase [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9BYK5Serine--tRNA ligase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) OX=398578 GN=serS PE=3 SV=1
Q21TF1Serine--tRNA ligase OS=Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=serS PE=3 SV=1
A1WBD4Serine--tRNA ligase OS=Acidovorax sp. (strain JS42) OX=232721 GN=serS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF02403Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042103Homologous_superfamilySerine-tRNA synthetase, type1, N-terminal domain superfamilyInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR033729DomainSerine-tRNA ligase catalytic core domainInterproscan
IPR002317FamilySerine-tRNA ligase, type1Interproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR015866DomainSerine-tRNA synthetase, type1, N-terminalInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43697SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01875SARS, serS; seryl-tRNA synthetaseEC:6.1.1.11
Transfer RNA biogenesisko03016deepkoala

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