Detailed information of HOLI00059.G25959 in Hydra oligactis

Genomic Location: HOLI00059:468138...469441
NR annotation: WP_105260080.1, tryptophan--tRNA ligase [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8P3Z4Tryptophan--tRNA ligase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=trpS PE=3 SV=1
Q8PFH5Tryptophan--tRNA ligase OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=trpS PE=3 SV=1
Q9PG74Tryptophan--tRNA ligase OS=Xylella fastidiosa (strain 9a5c) OX=160492 GN=trpS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036913Homologous_superfamilyYegP-like superfamilyInterproscan
IPR002305FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR002306FamilyTryptophan-tRNA ligaseInterproscan
IPR050203FamilyTryptophan--tRNA ligaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43766TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004830Molecular Functiontryptophan-tRNA ligase activityInterproscan
GO:0006436Biological Processtryptophanyl-tRNA aminoacylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01867WARS, trpS; tryptophanyl-tRNA synthetaseEC:6.1.1.2
Transfer RNA biogenesisko03016deepkoala

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