Gene detail

Detailed information of HOLI00059.G26051 in Hydra oligactis

Genomic Location: HOLI00059:607265...608548
NR annotation: CBA32649.1, Toxin RTX-I translocation ATP-binding protein [Curvibacter putative symbiont of Hydra magnipapillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P26760	Toxin RTX-I translocation ATP-binding protein OS=Actinobacillus pleuropneumoniae OX=715 GN=apxIB PE=1 SV=2
Q9RCG7	Exotoxin translocation ATP-binding protein PaxB OS=Pasteurella aerogenes OX=749 GN=paxB PE=3 SV=1
Q8FDZ8	Alpha-hemolysin translocation ATP-binding protein HlyB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=hlyB PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0034040	Molecular Function	ATPase-coupled lipid transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06147	ABCB-BAC; ATP-binding cassette, subfamily B, bacterial	-	Transporters	ko02000	deepkoala