Gene detail

Detailed information of HOLI00059.G26274 in Hydra oligactis

Genomic Location: HOLI00059:849782...851005
NR annotation: WP_105260388.1, lysine--tRNA ligase [Rhodoferax sp. TS-BS-61-7]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
C5CSG3	Lysine--tRNA ligase OS=Variovorax paradoxus (strain S110) OX=543728 GN=lysS PE=3 SV=1
A2SDC3	Lysine--tRNA ligase OS=Methylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1) OX=420662 GN=lysS PE=3 SV=1
Q1H372	Lysine--tRNA ligase OS=Methylobacillus flagellatus (strain ATCC 51484 / DSM 6875 / VKM B-1610 / KT) OX=265072 GN=lysS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00152	tRNA-synt_2	tRNA synthetases class II (D, K and N)	Domain	Interproscan
PF01336	tRNA_anti-codon	OB-fold nucleic acid binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR006195	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan
IPR004364	Domain	Aminoacyl-tRNA synthetase, class II (D/K/N)	Interproscan
IPR018149	Domain	Lysyl-tRNA synthetase, class II, C-terminal	Interproscan
IPR004365	Domain	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	Interproscan
IPR044136	Domain	Lysine-tRNA ligase, class II, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42918	LYSYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0004824	Molecular Function	lysine-tRNA ligase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006430	Biological Process	lysyl-tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan