Detailed information of HOLI00059.G26290 in Hydra oligactis

Genomic Location: HOLI00059:863415...866412
NR annotation: WP_105259882.1, citrate synthase [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P94325Citrate synthase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=gltA PE=3 SV=2
O33915Citrate synthase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=gltA PE=3 SV=2
P51038Citrate synthase, plasmid OS=Rhizobium tropici OX=398 GN=pcsA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00330AconitaseAconitase family (aconitate hydratase)FamilyInterproscan
PF03466LysR_substrateLysR substrate binding domainFamilyInterproscan
PF00126HTH_1Bacterial regulatory helix-turn-helix protein, lysR familyDomainInterproscan
PF00285Citrate_syntCitrate synthase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001030DomainAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainInterproscan
IPR005119DomainLysR, substrate-bindingInterproscan
IPR019810Active_siteCitrate synthase active siteInterproscan
IPR016142Homologous_superfamilyCitrate synthase-like, large alpha subdomainInterproscan
IPR010953FamilyCitrate synthase, type IInterproscan
IPR000847DomainTranscription regulator HTH, LysRInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR015931Homologous_superfamilyAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3Interproscan
IPR002020FamilyCitrate synthaseInterproscan
IPR016143Homologous_superfamilyCitrate synthase-like, small alpha subdomainInterproscan
IPR036008Homologous_superfamilyAconitase, iron-sulfur domainInterproscan
IPR036969Homologous_superfamilyCitrate synthase superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42871CITRATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046912Molecular Functionacyltransferase activity, acyl groups converted into alkyl on transferInterproscan
GO:0004108Molecular Functioncitrate (Si)-synthase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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