Detailed information of HOLI00059.G26417 in Hydra oligactis

Genomic Location: HOLI00059:1007959...1010673
NR annotation: WP_029705915.1, aminomethyl-transferring glycine dehydrogenase [Rhodoferax saidenbachensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C5CRW8Glycine dehydrogenase (decarboxylating) OS=Variovorax paradoxus (strain S110) OX=543728 GN=gcvP PE=3 SV=1
Q46VZ5Glycine dehydrogenase (decarboxylating) OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=gcvP PE=3 SV=1
Q1LHM2Glycine dehydrogenase (decarboxylating) OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) OX=266264 GN=gcvP PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02347GDC-PGlycine cleavage system P-proteinDomainInterproscan
PF21478GcvP2_CGlycine dehydrogenase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049315DomainGlycine cleavage system P-protein, N-terminal domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR049316DomainGlycine dehydrogenase, C-terminal domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR020581FamilyGlycine cleavage system P proteinInterproscan
IPR003437FamilyGlycine dehydrogenase (decarboxylating)Interproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0006544Biological Processglycine metabolic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0016594Molecular Functionglycine bindingInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00281GLDC, gcvP; glycine cleavage system P protein (glycine dehydrogenase)EC:1.4.4.2
Lipoic acid metabolismko00785deepkoala

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