Genomic Location: HOLI00099:239458...341259
NR annotation: XP_047122372.1, fibronectin type III domain-containing protein isoform X1 [Hydra vulgaris]
| CDS | |||||
| HOLI00099.g13388.t1 | |||||
| Transcript |
| HOLI00099.g13388.t1 |
| Protein |
| HOLI00099.G13388 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| O15541 | E3 ubiquitin-protein ligase RNF113A OS=Homo sapiens OX=9606 GN=RNF113A PE=1 SV=1 | ||||
| Q67ER4 | E3 ubiquitin-protein ligase RNF113A OS=Bos taurus OX=9913 GN=RNF113A PE=2 SV=1 | ||||
| B8VIW9 | Fibronectin type III domain-containing protein OS=Acropora millepora OX=45264 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-CCCH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13882 | Bravo_FIGEY | Bravo-like intracellular region | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR026966 | Domain | Neurofascin/L1/NrCAM, C-terminal domain | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR018957 | Domain | Zinc finger, C3HC4 RING-type | Interproscan |
| IPR039971 | Family | Pre-mRNA-splicing factor CWC24-like | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12930 | ZINC FINGER PROTEIN 183 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005684 | Cellular Component | U2-type spliceosomal complex | Interproscan |
| GO:0034247 | Biological Process | snoRNA splicing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06756 | NRCAM; neuronal cell adhesion molecule | - | Cell adhesion molecules | ko04514 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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