Gene detail

Detailed information of HOLI00150.G2022 in Hydra oligactis

Genomic Location: HOLI00150:214234...214689
NR annotation: OGO98213.1, MAG: RNA-binding protein [Curvibacter sp. GWA2_63_95]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q44554	Putative RNA-binding protein RbpB OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbpB PE=3 SV=3
Q44560	Putative RNA-binding protein RbpA OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbpA PE=3 SV=3
Q9WX37	Putative RNA-binding protein RbpE OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbpE PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050886	Family	RNA-binding_regulatory_proteins	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR048289	Domain	NsCP33-like, RNA recognition motif 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48024	GEO13361P1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan