Gene detail

Detailed information of HOLI00150.G2117 in Hydra oligactis

Genomic Location: HOLI00150:311634...312538
NR annotation: BDT71918.1, alanine--tRNA ligase [Comamonadaceae bacterium OS-4]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q221G2	Alanine--tRNA ligase OS=Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=alaS PE=3 SV=1
A1VQK2	Alanine--tRNA ligase OS=Polaromonas naphthalenivorans (strain CJ2) OX=365044 GN=alaS PE=3 SV=1
Q129G8	Alanine--tRNA ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) OX=296591 GN=alaS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01411	tRNA-synt_2c	tRNA synthetases class II (A)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050058	Family	Alanine--tRNA ligase	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR018162	Homologous_superfamily	Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily	Interproscan
IPR018165	Domain	Alanyl-tRNA synthetase, class IIc, core domain	Interproscan
IPR018164	Domain	Alanyl-tRNA synthetase, class IIc, N-terminal	Interproscan
IPR002318	Family	Alanine-tRNA ligase, class IIc	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11777	ALANYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002161	Molecular Function	aminoacyl-tRNA editing activity	Interproscan
GO:0004813	Molecular Function	alanine-tRNA ligase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006419	Biological Process	alanyl-tRNA aminoacylation	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan