Detailed information of HOLI00150.G2118 in Hydra oligactis

Genomic Location: HOLI00150:312908...313594
NR annotation: WP_105260948.1, alanine--tRNA ligase [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1VQK2Alanine--tRNA ligase OS=Polaromonas naphthalenivorans (strain CJ2) OX=365044 GN=alaS PE=3 SV=1
A1W7D0Alanine--tRNA ligase OS=Acidovorax sp. (strain JS42) OX=232721 GN=alaS PE=3 SV=1
A9C0B9Alanine--tRNA ligase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) OX=398578 GN=alaS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF02272DHHA1DHHA1 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR003156DomainDHHA1 domainInterproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR050058FamilyAlanine--tRNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11777ALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan

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