Gene detail

Detailed information of HOLI00150.G2131 in Hydra oligactis

Genomic Location: HOLI00150:326406...327332
NR annotation: WP_105260515.1, pseudouridine synthase [Rhodoferax sp. TS-BS-61-7]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8ZIK1	Dual-specificity RNA pseudouridine synthase RluA OS=Yersinia pestis OX=632 GN=rluA PE=3 SV=1
P72970	Uncharacterized RNA pseudouridine synthase slr1592 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=slr1592 PE=3 SV=1
Q8Z9J5	Dual-specificity RNA pseudouridine synthase RluA OS=Salmonella typhi OX=90370 GN=rluA PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00849	PseudoU_synth_2	RNA pseudouridylate synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006224	Conserved_site	Pseudouridine synthase, RluA-like, conserved site	Interproscan
IPR050188	Family	RluA Pseudouridine Synthase	Interproscan
IPR020103	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan
IPR006145	Domain	Pseudouridine synthase, RsuA/RluA-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21600	MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001522	Biological Process	pseudouridine synthesis	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0009451	Biological Process	RNA modification	Interproscan
GO:0009982	Molecular Function	pseudouridine synthase activity	Interproscan
GO:0000455	Biological Process	enzyme-directed rRNA pseudouridine synthesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06177	rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase	EC:5.4.99.28 EC:5.4.99.29	Transfer RNA biogenesis	ko03016	deepkoala