Detailed information of HOLI00150.G2213 in Hydra oligactis

Genomic Location: HOLI00150:411434...413846
NR annotation: WP_105260617.1, exodeoxyribonuclease VII large subunit [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9BWI7Exodeoxyribonuclease 7 large subunit OS=Delftia acidovorans (strain DSM 14801 / SPH-1) OX=398578 GN=xseA PE=3 SV=1
Q8XWE7Exodeoxyribonuclease 7 large subunit OS=Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000) OX=267608 GN=xseA PE=3 SV=1
Q475F5Exodeoxyribonuclease 7 large subunit OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=xseA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13742tRNA_anti_2OB-fold nucleic acid binding domainDomainInterproscan
PF00081Sod_Fe_NIron/manganese superoxide dismutases, alpha-hairpin domainDomainInterproscan
PF02777Sod_Fe_CIron/manganese superoxide dismutases, C-terminal domainDomainInterproscan
PF02601Exonuc_VII_LExonuclease VII, large subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036324Homologous_superfamilyManganese/iron superoxide dismutase, N-terminal domain superfamilyInterproscan
IPR003753FamilyExonuclease VII, large subunitInterproscan
IPR036314Homologous_superfamilyManganese/iron superoxide dismutase, C-terminal domain superfamilyInterproscan
IPR025824DomainOB-fold nucleic acid binding domainInterproscan
IPR019831DomainManganese/iron superoxide dismutase, N-terminalInterproscan
IPR019832DomainManganese/iron superoxide dismutase, C-terminalInterproscan
IPR001189FamilyManganese/iron superoxide dismutaseInterproscan
IPR020579DomainExonuclease VII, large subunit, C-terminalInterproscan
IPR019833Binding_siteManganese/iron superoxide dismutase, binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30008EXODEOXYRIBONUCLEASE 7 LARGE SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006308Biological ProcessDNA catabolic processInterproscan
GO:0008855Molecular Functionexodeoxyribonuclease VII activityInterproscan
GO:0009318Cellular Componentexodeoxyribonuclease VII complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004784Molecular Functionsuperoxide dismutase activityInterproscan
GO:0006801Biological Processsuperoxide metabolic processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

TOP