Detailed information of HOLI00150.G2428 in Hydra oligactis

Genomic Location: HOLI00150:663343...665532
NR annotation: WP_105260845.1, oxygen-dependent coproporphyrinogen oxidase [Rhodoferax sp. TS-BS-61-7]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12C42Oxygen-dependent coproporphyrinogen-III oxidase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) OX=296591 GN=hemF PE=3 SV=1
A1VN15Oxygen-dependent coproporphyrinogen-III oxidase OS=Polaromonas naphthalenivorans (strain CJ2) OX=365044 GN=hemF PE=3 SV=1
C5CLQ3Oxygen-dependent coproporphyrinogen-III oxidase OS=Variovorax paradoxus (strain S110) OX=543728 GN=hemF PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01218Coprogen_oxidasCoproporphyrinogen III oxidaseFamilyInterproscan
PF01467CTP_transf_likeCytidylyltransferase-likeDomainInterproscan
PF02410RsfSRibosomal silencing factor during starvation FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001260FamilyCoproporphyrinogen III oxidase, aerobicInterproscan
IPR036406Homologous_superfamilyOxygen-dependent coproporphyrinogen III oxidase superfamilyInterproscan
IPR004394FamilyProtein Iojap/ribosomal silencing factor RsfSInterproscan
IPR005248FamilyNicotinate/nicotinamide nucleotide adenylyltransferaseInterproscan
IPR004821DomainCytidyltransferase-like domainInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR018375Conserved_siteCoproporphyrinogen III oxidase, conserved siteInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10755COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004109Molecular Functioncoproporphyrinogen oxidase activityInterproscan
GO:0006779Biological Processporphyrin-containing compound biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006782Biological Processprotoporphyrinogen IX biosynthetic processInterproscan
GO:0009435Biological ProcessNAD biosynthetic processInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan

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