Detailed information of HOLI00164.G13528 in Hydra oligactis

Genomic Location: HOLI00164:103766...161265
NR annotation: XP_047128416.1, sex comb on midleg-like protein 2 isoform X4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9VHA0Polycomb protein Scm OS=Drosophila melanogaster OX=7227 GN=Scm PE=1 SV=2
Q64028Polyhomeotic-like protein 1 OS=Mus musculus OX=10090 GN=Phc1 PE=1 SV=3
Q4V7W5Polyhomeotic-like protein 2 OS=Xenopus laevis OX=8355 GN=phc2 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF02820MBTmbt repeatDomainInterproscan
PF12140SLEDSLED domainDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR038348Homologous_superfamilySLED domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR004092RepeatMbt repeatInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR021987DomainSLED domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR050548FamilyPolycomb group and chromatin remodeling factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan

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