Detailed information of HOLI00172.G6426 in Hydra oligactis

Genomic Location: HOLI00172:360910...391812
NR annotation: AWU22326.1, nuclear lamin protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11048Lamin-A OS=Xenopus laevis OX=8355 GN=lmna PE=2 SV=1
P09010Lamin-B1.S OS=Xenopus laevis OX=8355 GN=lmnb1.S PE=2 SV=1
P48678Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00932LTDLamin Tail DomainDomainInterproscan
PF00038FilamentIntermediate filament proteinCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018039Conserved_siteIntermediate filament protein, conserved siteInterproscan
IPR036415Homologous_superfamilyLamin tail domain superfamilyInterproscan
IPR001322DomainLamin tail domainInterproscan
IPR039008DomainIntermediate filament, rod domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45721LAMIN DM0-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005635Cellular Componentnuclear envelopeInterproscan
GO:0005652Cellular Componentnuclear laminaInterproscan
GO:0006998Biological Processnuclear envelope organizationInterproscan
GO:0007097Biological Processnuclear migrationInterproscan
GO:0031507Biological Processheterochromatin formationInterproscan
GO:0051664Biological Processnuclear pore localizationInterproscan
GO:0090435Biological Processprotein localization to nuclear envelopeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07611LMNB; lamin B-Cytoskeleton proteinsko04812deepkoala

TOP