Detailed information of HOLI00176.G22265 in Hydra oligactis

Genomic Location: HOLI00176:343383...416376
NR annotation: XP_047132106.1, usherin isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75445Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3
Q8K3K1Usherin OS=Rattus norvegicus OX=10116 GN=Ush2a PE=1 SV=2
Q2QI47Usherin OS=Mus musculus OX=10090 GN=Ush2A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR050713FamilyReceptor-type Tyrosine-protein Phosphatases/UshersInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46957CYTOKINE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19636USH2A; usherin-Cilium and associated proteinsko03037deepkoala

TOP