Detailed information of HOLI00179.G36810 in Hydra oligactis

Genomic Location: HOLI00179:583650...603898
NR annotation: XP_047142366.1, LIM/homeobox protein Lhx5 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P29674LIM/homeobox protein Lhx1 OS=Xenopus laevis OX=8355 GN=lhx1 PE=1 SV=1
Q9H2C1LIM/homeobox protein Lhx5 OS=Homo sapiens OX=9606 GN=LHX5 PE=1 SV=1
P61375LIM/homeobox protein Lhx5 OS=Mus musculus OX=10090 GN=Lhx5 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR050453FamilyLIM/homeobox transcription factorsInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24208LIM/HOMEOBOX PROTEIN LHXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030182Biological Processneuron differentiationInterproscan

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