Gene detail

Detailed information of HOLI00256.G40355 in Hydra oligactis

Genomic Location: HOLI00256:33713...34129
NR annotation: TXH93486.1, DEAD/DEAH box helicase [Rheinheimera sp.]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8K9H6	ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=deaD PE=3 SV=1
P57453	ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=deaD PE=3 SV=1
P33906	ATP-dependent RNA helicase DeaD OS=Klebsiella pneumoniae OX=573 GN=deaD PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR050547	Family	DEAD box ATP-dependent RNA helicases	Interproscan
IPR000629	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47963	DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0009409	Biological Process	response to cold	Interproscan
GO:0033592	Molecular Function	RNA strand annealing activity	Interproscan