Genomic Location: HOLI00256:72137...73500
NR annotation: MBD1201409.1, methionyl-tRNA formyltransferase [Vibrio cholerae]
| CDS | ||||
| HOLI00256.g40400.t1 | ||||
| Transcript |
| HOLI00256.g40400.t1 |
| Protein |
| HOLI00256.G40400 |
| Uniprot term | Description |
|---|---|
| Q12TA6 | Methionyl-tRNA formyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) OX=318161 GN=fmt PE=3 SV=1 |
| Q08A29 | Methionyl-tRNA formyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=fmt PE=3 SV=1 |
| A0KR60 | Methionyl-tRNA formyltransferase OS=Shewanella sp. (strain ANA-3) OX=94122 GN=fmt PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00551 | Formyl_trans_N | Formyl transferase | Domain | Interproscan |
| PF02911 | Formyl_trans_C | Formyl transferase, C-terminal domain | Domain | Interproscan |
| PF01327 | Pep_deformylase | Polypeptide deformylase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036477 | Homologous_superfamily | Formyl transferase, N-terminal domain superfamily | Interproscan |
| IPR002376 | Domain | Formyl transferase, N-terminal | Interproscan |
| IPR023635 | Family | Peptide deformylase | Interproscan |
| IPR011034 | Homologous_superfamily | Formyl transferase-like, C-terminal domain superfamily | Interproscan |
| IPR001555 | Active_site | Phosphoribosylglycinamide formyltransferase, active site | Interproscan |
| IPR005793 | Domain | Formyl transferase, C-terminal | Interproscan |
| IPR005794 | Family | Methionyl-tRNA formyltransferase | Interproscan |
| IPR044135 | Domain | Methionyl-tRNA formyltransferase, C-terminal domain | Interproscan |
| IPR036821 | Homologous_superfamily | Peptide deformylase superfamily | Interproscan |
| IPR041711 | Domain | Methionyl-tRNA formyltransferase, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11138 | METHIONYL-TRNA FORMYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0009058 | Biological Process | biosynthetic process | Interproscan |
| GO:0042586 | Molecular Function | peptide deformylase activity | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0004479 | Molecular Function | methionyl-tRNA formyltransferase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0071951 | Biological Process | conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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