Gene detail

Detailed information of HOLI00256.G40536 in Hydra oligactis

Genomic Location: HOLI00256:198244...199409
NR annotation: TXH94849.1, GGDEF domain-containing protein [Rheinheimera sp.]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9HT84	Diguanylate cyclase DgcP OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dgcP PE=1 SV=1
A0A0H2ZJS2	Diguanylate cyclase DgcP OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=dgcP PE=1 SV=1
P0AAP2	Probable diguanylate cyclase DgcC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=dgcC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01026	TatD_DNase	TatD related DNase	Domain	Interproscan
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000160	Domain	GGDEF domain	Interproscan
IPR001130	Family	3'-5' ssDNA/RNA exonuclease TatD-like	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR050469	Family	Bacterial Diguanylate Cyclase	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR032466	Homologous_superfamily	Metal-dependent hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0043709	Biological Process	cell adhesion involved in single-species biofilm formation	Interproscan
GO:0052621	Molecular Function	diguanylate cyclase activity	Interproscan
GO:1902201	Biological Process	negative regulation of bacterial-type flagellum-dependent cell motility	Interproscan