Gene detail

Detailed information of HOLI00256.G40585 in Hydra oligactis

Genomic Location: HOLI00256:232461...234356
NR annotation: WP_031570287.1, Tex family protein [Pararheinheimera texasensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P46837	Protein YhgF OS=Escherichia coli (strain K12) OX=83333 GN=yhgF PE=1 SV=3
P71353	Uncharacterized protein HI_0568 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0568 PE=4 SV=1
Q51152	Uncharacterized protein NMB0075 OS=Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58) OX=122586 GN=NMB0075 PE=4 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12836	HHH_3	Helix-hairpin-helix motif	Domain	Interproscan
PF09371	Tex_N	Tex-like protein N-terminal domain	Domain	Interproscan
PF16921	Tex_YqgF	Tex protein YqgF-like domain	Domain	Interproscan
PF17674	HHH_9	HHH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023319	Homologous_superfamily	Tex-like protein, HTH domain superfamily	Interproscan
IPR018974	Domain	Tex-like protein, N-terminal	Interproscan
IPR032639	Domain	Tex protein, YqgF-like domain	Interproscan
IPR010994	Homologous_superfamily	RuvA domain 2-like	Interproscan
IPR037027	Homologous_superfamily	YqgF/RNase H-like domain superfamily	Interproscan
IPR050437	Family	Bacterial ribosomal protein bS1	Interproscan
IPR006641	Domain	YqgF/RNase H-like domain	Interproscan
IPR041692	Domain	HHH domain 9	Interproscan
IPR023323	Homologous_superfamily	Tex-like domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10724	30S RIBOSOMAL PROTEIN S1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006139	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006412	Biological Process	translation	Interproscan