Detailed information of HOLI00264.G2943 in Hydra oligactis

Genomic Location: HOLI00264:100794...101769
NR annotation: MBT9442955.1, winged helix-turn-helix domain-containing protein [Acidovorax sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E1WA34Transcriptional regulatory protein TctD OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=tctD PE=3 SV=1
P0CL17Transcriptional regulatory protein TctD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=tctD PE=2 SV=1
P52076Transcriptional regulatory protein QseB OS=Escherichia coli (strain K12) OX=83333 GN=qseB PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR016032Homologous_superfamilySignal transduction response regulator, C-terminal effectorInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan

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