Gene detail

Detailed information of HOLI00299.G46962 in Hydra oligactis

Genomic Location: HOLI00299:466797...467942
NR annotation: WP_211253360.1, EAL domain-containing protein [Pararheinheimera texasensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8EJM6	Cyclic di-GMP phosphodiesterase PdeB OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=pdeB PE=1 SV=1
Q9ABX9	Uncharacterized signaling protein CC_0091 OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=CC_0091 PE=1 SV=1
Q2RBR1	Phototropin-1B OS=Oryza sativa subsp. japonica OX=39947 GN=PHOT1B PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08447	PAS_3	PAS fold	Domain	Interproscan
PF13426	PAS_9	PAS domain	Domain	Interproscan
PF00990	GGDEF	Diguanylate cyclase, GGDEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013655	Domain	PAS fold-3	Interproscan
IPR035965	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR000014	Domain	PAS domain	Interproscan
IPR000160	Domain	GGDEF domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000700	Domain	PAS-associated, C-terminal	Interproscan
IPR029787	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR001610	Repeat	PAC motif	Interproscan
IPR052163	Family	Diguanylate Cyclase/Regulatory Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46663	DIGUANYLATE CYCLASE DGCT-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan