Detailed information of HOLI00299.G47010 in Hydra oligactis

Genomic Location: HOLI00299:511314...513040
NR annotation: WP_051686075.1, 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF [Pararheinheimera texasensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4KHU0Ribosomal RNA large subunit methyltransferase F OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rlmF PE=3 SV=2
A7MEZ1Ribosomal RNA large subunit methyltransferase F OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=rlmF PE=3 SV=1
Q3KHM8Ribosomal RNA large subunit methyltransferase F OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=rlmF PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05971Methyltransf_10RNA methyltransferaseFamilyInterproscan
PF13377Peripla_BP_3Periplasmic binding protein-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR010286FamilyMETTL16/RlmF familyInterproscan
IPR016909FamilyRibosomal RNA large subunit methyltransferase FInterproscan
IPR046335DomainTranscriptional regulator LacI/GalR-like, sensor domainInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13393SAM-DEPENDENT METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0008988Molecular FunctionrRNA (adenine-N6-)-methyltransferase activityInterproscan
GO:0052907Molecular Function23S rRNA (adenine(1618)-N(6))-methyltransferase activityInterproscan
GO:0070475Biological ProcessrRNA base methylationInterproscan

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