Gene detail

Detailed information of HOLI00319.G46193 in Hydra oligactis

Genomic Location: HOLI00319:108524...141857
NR annotation: XP_047142339.1, major vault protein [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00319.g46193.t1

ATGAACAGTGCTTCTAACATTAATTGTTTTGAATTGAGTTCAAAACTTTTTGATAAAGTTGCCTATAATGTTGCAACAGATTGGTCTAGACTTGGACGCTATCTTGACTTAACAAATGAAGAAATAGCAATGATCGACTCTGACTACGGTAAAACTCATGAGAAAGCTAATCAAGTTTTAGTAAAGTGGAGGCAAAAAATTGGAAATGTGACATGGCAGCAATTAAAAAAGAACTTGGAATCAATTGAGCGTTTTGATATAATTAGACAAATTGAAAAAGATTTAGTAGGTATTCTAACTCGACCAGGCACCATTGGTGGTGAAAATACTCAACTAAGTATCATTATTGGTGAAAAAGCTCAACCAGCCAAGAGCAGAGTTGCTGATAAGAAATCATTGCTTCAAAATCCTGGTGTTGATGGTATAAGGAATTATAAAATTCCACCTTATTTTTATGTCCATATCCTAGACCAAAATACTAATGTTGCTCGTGTTGAAGTTGGGCCACAAAATTATATCTGTCACGATAATGAAAATTATATATTTGGACCATATCCAATGGTAACCATTCCTACACATCATTACTGCATTATTGAAAATCCAGTTATTTATTATGAAAATGTTGTTGATCTTGATTTAAATGGTCAAGCTAGAATCAAGTATGGTGAATTAGAAGTACGCTTTACACAAGATCCATTTCCTCTTTATCCTGGAGAAGTCGTTAAACAATCTCCAATTCCATTTACAGTTTTAGAAGCAAACACAGCATTGCATTTAAGAGCAGCAATGCAATTTTCTAATAATGATGGGAAAAAATATGTTGCAGGTGATGAGTGGCTATTTGAAGGGCCTGGTACATATATACCACGTAAAGAAGTTGACGTGATTAAAAAGATTCATGCCACAATAATTAAACATAATCAGGCCATTAAATTGCGTGCTCGTAGAGAAACTAAGGATAGATATGGAACTAAACGAGTTACAGGAGAAGAATGGTTATTTAGAAAAATGTGTGCTTATCTTCCTGACGTTTTTGAAGAAGTTATTGAAGTTCTAGATGCTTACATATTGACTGAAAAAATAGCATTGCATATGAAAGCTACACGTACATTCTTTGATGATAGATTTGAGAATAAAAAGAAAAGAAAAAATGGCGAAGAATGGCTCATTACATCAATAGACACAGAAAACCATATTCCGAATGTTTATGAGCAAATTGTTACCATTGTCAACATTACAACATTAAACAACAGACAATTTTGTGTAGTATGTGATCCAGTGGATGCAGATGGTAAACCACAGCTTGGTTTTAAGAAACTTGTTAAGGGGAAAAAATCATTTTTCCTTCAACCAGGAGAAAGTCTTGAAAATGGAATACAAAATGTGTTTGTACTTTCCGAACATGAAAGTCTTATATTAAAAGCTACAAAAAAGTTTATTGATGATGATAATGAATGTGCTCCTGGAGATATATGGATGATACAAGGTCCATGTGAATATGTCCCACCAGTTGAGGTTGAGGTTTGTTGTGTTCGCAAAGCAATTACTCTTGATGCTAATGAGGGGGTGTATGTAAGAAATATAAAGACAGGTAAGGTGCGTGCTGTGATTGGTTGCACATATATGCTTAACCAAGATGAAGAATTATGGCAAAAAGAACTTCCACCTGTAGTTGAGGATTTGCTTAGTTCTGGGATGAATTCATTGGAAGATAGAAGCGACAGAAAATGGATAACTGAAAAACTAATAGCTAGAGATAAAACAAAAGTTGTGGTGTATAGAGTTCCATACAATGCTGCTGTGCAAATCTATGATTATAAAGAGAAAAAGTCTAGAATTGTATTTGGTTCAGATGTTGTTATGCTGGAACCTCATGAGCAATTCACAGTACTGAGCATATCTGGTGGTATACCTAAACAACCGAATGCTATTAAAGCACTATGTTTGTTTTTGGGCCCTGATTTTGCAACAGATATTGTGGATGTTAAAACCGCTGATCATGTACAACTTTCATTGCAACTATCTTACAACTGGAACTTTGATAAATCTAATGGTGAATTACTTTTCTCGGTTCCTGATTTTATAGGCAATGCCTGTAAAACAATCGCTTCTCGTCTACGTGGTGCTGTTGCAACTCTTAAATTCTTAGATTTTCACAAAAATTATGCACAAATCATTCGTTCCGCGGTATTTGGTCTTGACGACAACAAAGAGGTCCGTAAAAATTATACTTTTTCATTAAACAACCTGAACATCACTAGTGTTGATATTCAGTCGGTTGAGGCTGTAACCAACATTCTCGAATAG

Transcript

HOLI00319.g46193.t1

Protein

Uniprot

Uniprot term	Description
Q6PF69	Major vault protein OS=Xenopus laevis OX=8355 GN=mvp PE=2 SV=1
Q5EAJ7	Major vault protein OS=Strongylocentrotus purpuratus OX=7668 GN=MVP PE=1 SV=1
Q6P3L0	Major vault protein OS=Danio rerio OX=7955 GN=mvp PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17794	Vault_2	Major Vault Protein repeat domain	Domain	Interproscan
PF00531	Death	Death domain	Domain	Interproscan
PF01505	Vault	Major Vault Protein repeat domain	Domain	Interproscan
PF17795	Vault_3	Major Vault Protein Repeat domain	Domain	Interproscan
PF11978	MVP_shoulder	Shoulder domain	Domain	Interproscan
PF17796	Vault_4	Major Vault Protein repeat domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002499	Repeat	Major vault protein, N-terminal	Interproscan
IPR041134	Domain	Major vault protein repeat domain 2	Interproscan
IPR043023	Homologous_superfamily	Major vault protein repeat domain superfamily	Interproscan
IPR039059	Family	Major vault protein	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR036013	Homologous_superfamily	Band 7/SPFH domain superfamily	Interproscan
IPR041139	Domain	Major vault protein repeat domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR043179	Homologous_superfamily	Major vault protein repeat domain 2 superfamily	Interproscan
IPR040989	Domain	Major vault protein repeat domain 3	Interproscan
IPR021870	Domain	Major vault protein, shoulder domain	Interproscan
IPR041136	Domain	Major vault protein repeat domain 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14165	MAJOR VAULT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan