Detailed information of HOLI00344.G6815 in Hydra oligactis

Genomic Location: HOLI00344:371716...402255
NR annotation: XP_002159375.4, integrin beta-1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P07228Integrin beta-1 OS=Gallus gallus OX=9031 GN=ITGB1 PE=1 SV=1
P05556Integrin beta-1 OS=Homo sapiens OX=9606 GN=ITGB1 PE=1 SV=2
P49134Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07974EGF_2EGF-like domainDomainInterproscan
PF00362Integrin_betaIntegrin beta chain VWA domainDomainInterproscan
PF07965Integrin_B_tailIntegrin beta tail domainDomainInterproscan
PF08725Integrin_b_cytIntegrin beta cytoplasmic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR002369DomainIntegrin beta subunit, VWA domainInterproscan
IPR014836DomainIntegrin beta subunit, cytoplasmic domainInterproscan
IPR015812FamilyIntegrin beta subunitInterproscan
IPR036349Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR012896DomainIntegrin beta subunit, tailInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10082INTEGRIN BETA SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05719ITGB1, CD29; integrin beta 1-CD moleculesko04090deepkoala

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