Detailed information of HOLI00353.G42851 in Hydra oligactis

Genomic Location: HOLI00353:122995...123750
NR annotation: WP_031571765.1, YebC/PmpR family DNA-binding transcriptional regulator [Pararheinheimera texasensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7N550Probable transcriptional regulatory protein plu2109 OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=plu2109 PE=3 SV=1
Q8EEF0Probable transcriptional regulatory protein SO_2432 OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=SO_2432 PE=3 SV=1
B4ETP5Probable transcriptional regulatory protein PMI1113 OS=Proteus mirabilis (strain HI4320) OX=529507 GN=PMI1113 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01709Transcrip_regTACO1/YebC second and third domainFamilyInterproscan
PF20772TACO1_YebC_NTACO1/YebC protein N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002876FamilyTranscriptional regulator TACO1-likeInterproscan
IPR029072Homologous_superfamilyYebC-likeInterproscan
IPR026564Homologous_superfamilyTranscriptional regulator TACO1-like, domain 3Interproscan
IPR048300DomainTACO1/YebC-like, second and third domainsInterproscan
IPR049083DomainTACO1/YebC-like, N-terminal domainInterproscan
IPR017856Homologous_superfamilyIntegrase-like, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12532UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan

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