Gene detail

Detailed information of HOLI00447.G28318 in Hydra oligactis

Genomic Location: HOLI00447:89973...118287
NR annotation: XP_002159641.1, serine/arginine-rich splicing factor 1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q0VCY7	Serine/arginine-rich splicing factor 1 OS=Bos taurus OX=9913 GN=SRSF1 PE=2 SV=1
Q07955	Serine/arginine-rich splicing factor 1 OS=Homo sapiens OX=9606 GN=SRSF1 PE=1 SV=2
Q6PDM2	Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01161	PBP	Phosphatidylethanolamine-binding protein	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035810	Family	Phosphatidylethanolamine-binding protein, eukaryotic	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR036610	Homologous_superfamily	PEBP-like superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR008914	Family	Phosphatidylethanolamine-binding protein	Interproscan
IPR050374	Family	RRT5/SRSF/Splicing Factor SR	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan