Detailed information of HOLI00459.G54295 in Hydra oligactis

Genomic Location: HOLI00459:324232...326511
NR annotation: VBB18364.1, DEAD/SNF2-like helicase [Yasminevirus sp. GU-2018]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86WJ1Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3
Q9CXF7Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus OX=10090 GN=Chd1l PE=1 SV=1
Q3B7N1Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR050628FamilySNF2/RAD54 Helicase and Transcription FactorInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan

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