Gene detail

Detailed information of HOLI00459.G54304 in Hydra oligactis

Genomic Location: HOLI00459:347854...351123
NR annotation: VBB18374.1, lon protease homolog, partial [Yasminevirus sp. GU-2018]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00459.g54304.t1

ATGTGTAGTGATTTACAATTGACAATTAAGAACTTTATAAAAAACGAGTACTCGCTAAGAGCCGACATACTTAGTAATATATGTAGACACATCGATAATATGAACCATAAAAGTATTATACATCATACAAACAGAAATAAATTAATGAACAAAGTTAGTTCATGCATAATCATGCTTAACTCGTGCTATAATAACAGCCTTCCACTTTACAAAAAAATGGGATATGACCCAAGTCCTATTGAGTTGATATTAATAAAAAGTGGTAATTTTTTAGAATTTATAAAATTAACATCGACATTTAATTCCCCAATTAGGGGCAAAATTAACGATTTTTTCGAAAGTGTCGATATAGATATTTATGAACTAATGAAGACTATCGGATCAAATTCAGTTGCAGACATACTTAATCTAAGTATAGGCAGCAACTATCGTGAAATAATGGGTGTTGATTCAGATCTTAAAGACATTATACAGTTTGTGCAAGAAAACAAAAAGAACATAAGTATCAAAGATTACATGATTAAACTTCATAACTCGTCTGCTTTGGTTGACATAATAGAAAAACAGTTTATACCCGTAGAACTAAAAGTAAGTTCCCAGATTTTTAATGGTCCAAAAACAGCGATTCTTATTAATCGCCATAAATACGATAAAGTTGTTAACTCGGAGGAGTCGTCAAAATTTAAATTTGAAATTATGCTTGAAAACTGCTTTAAAATAATAATAAAATGTGCAAAAACAAAAAAAATATTTATTATATATGGATACTTCGATTATGATGTCACAAATACTTTTGTGACCACGTCCCAGGTATGTACAAATTATATTTACCAAAAAAGGAAGCTATTAATTGAATATGCAAGAAATAAAGTAAATATTAATAGGGAGTATAAAGACGTATATTTATCTAATATGTCTCTTGGTGACATACTTTCTTATAAAGGCAATAATCTTGTTGAAAAATTACTTGCCGATTACGAACTTTACACAAAAGCCTGTAACATTAAGTTTAAAGCAACTGTAAATGATTTTTTGTCTGCGGATTTAACAAGAAAATACAATATTCTCAGATGTCTTCTTCTTGGACCGAAAAGTTCAATAAAGAATGCAGCCATGTTATTTGGAATGACAAAAGATCAAAATAGAGATTCAACAAATAATCAAACATGTGTTGCGGACATATTATTTAGAAATCTTAACCATTATCAACAATGCAGATTAAGAAAGTCCGAACAATATGTTAAACAAGAGTTAGAACGTATTAAAAAAATGACATCAGATGATATGGATCTTAAACAACAATGTGTTATGAATAATAACATGGATGATTATGTTAAGAAATGTGCGCTATCCCGCCTTGAAGAAATGAAATCAGGTAATAACGAGTATCATAAAAATCTTACTTATGTTAGGACATTGATTGATTATCCATGGGTTCCTAAAGACTATTCCGATATGTTTACCAATATTGGCAAAGATCTTGATAAATGTAGAGATAAATTGAGAAAAGTAAAAGAAGAGTTTGATTTAAGAGTTTTTGGTCAAAACGAGTTTAAAACAGTTATTGGGGATATTGTAGGTAAGTGGTTTACAAACCCAAACAGTTTAGGTAAAGCAATTTGTCTTTGCGGACCTCCTGGCTGCGGAAAGACTTTAATCGCATCAGGTTTGGGAAAAGTGTTAAATATTCCCTACCAAGAAATTCACCTCGGTGGTCTAGAAGATGGATCTGTACTTAACGGTCACTCATTCACATACTCCGGCGCTCAACCCAGTCTTATTGTAACAAAGATGGTTGCGGCCGGGGAACCGAGATGTGTTTTATTTTTTGACGAGCTCGACAAGACATGTTGTAAGCATGGGATTAATGAAGTGTTTAATGTCCTTATTCACGTTACAGATCCAAACACAAACTCAAAGTTTAACGACAAATTTTTCCAAGATGTTACATTTCCTTTAAACAAATGTATTTTTGTTTTTAGTTTTAATGATGCTTCAAAAATTGACCCGATATTAAAAGATAGAATGGAAATTATTGAAGTATCGCCTTATTCACTAAGTGACAAACTTGAGATTTCAAAAAGTTACTTGATACCCGAAGTGTCAGATAGCGTTGGTATTGAAAAGGGATCAGTTTTAATATCTCCGCAAACTATCGAGCAAATTGTTACAAAATACACACTTGAGGCAGGAGTTAGAAAACTTAGGGGATGTATTGAAAAGATTTTTCTTAAATTAAATATTGATCGTATTTATGGAAGAGGACCGTTTAAAAACAAAAAAAACTTTAGTTCTAAACAACCAATAACTATTACCAAAAAACACATACTAAAATATTTAGGAAAACCAAAAATTGCGATTGAAAAAATTCATAACACAGACCATATTGGCGTAATTAACGGTATGTATGCAACTACATCAGGATCTGGTGGTATTTTACCGATTCTTGTTTATCCCGCAAAACATGGACATTCAAAACCCACGTTGGAACTTACGGGCAAACAAGGCAAAGTTATGAAAGAATCAATTAACTTTGCATGGACAATTGCGAAAAATTGCTCAAAAAATGAAATAGTAGAAAAGTTTTATAAACACAATAAAGGGGGTATACACGTACATACTCCAGATGGAGCTGTTCCAAAAGATGGCCCTTCTGCTGGTTCTGCATTTACAACTGCTTTTTTGTCAAGACTTACAGGCTTTCCTGTTAAACACGAGATTGCAATGACTGGTGAAATTAGTATCGGAGGTAATGTTACAGCAATCGGCGGTCTTGAGCATAAACTTTCGGGTGCAAAAATAGCAGGTGTTAAACTCGTATTTGTATGTGAAGAAAATATCGATGATTTAAAAAAAATTAAAGAAACTAATCCCGGACTGTTTAATCTTACAAATGTTTACAAGAATGCAAAAGTGCACAAAGTTATTGACGAAGTCTGCAAAAAGAAAAACTCAAATGTCGGCGACTTTAAGATCATTGTTGTAAACACAATTTACGACATAATTCCCTATGCACTTCTTGACATAACATTTATTAAGAAAACTTATGATAATTGCGCATACACCGTATATGATAAGACATGTGATTGGAATGATTTTATGACAAAAAACAACGATGGTTTTGACAATAATCTTGTCGAGATCGATAATATTGTTATAAACGACGATTTTGACAATATTGATAGTGGCGATGACAATGATAATAATGACAATGATAATAATGACAATAATTCTGACGATACATGTTGTGATACCGATAGTGATAAATAA

Transcript

HOLI00459.g54304.t1

Protein

Uniprot

Uniprot term	Description
Q5UPT0	Lon protease homolog OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L251 PE=3 SV=1
A5FG89	Lon protease OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=lon PE=3 SV=1
A7ZEJ3	Lon protease OS=Campylobacter concisus (strain 13826) OX=360104 GN=lon PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF05362	Lon_C	Lon protease (S16) C-terminal proteolytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008269	Domain	Peptidase S16, Lon proteolytic domain	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR027065	Family	Lon protease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43718	LON PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0006515	Biological Process	protein quality control for misfolded or incompletely synthesized proteins	Interproscan
GO:0007005	Biological Process	mitochondrion organization	Interproscan
GO:0030163	Biological Process	protein catabolic process	Interproscan
GO:0051131	Biological Process	chaperone-mediated protein complex assembly	Interproscan