Detailed information of HOLI00459.G54309 in Hydra oligactis

Genomic Location: HOLI00459:359220...362345
NR annotation: QBK89180.1, MAG: DNA-directed RNA polymerase subunit beta [Mimivirus LCMiAC02]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7T6X7DNA-directed RNA polymerase subunit 2 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=RPO2 PE=1 SV=2
Q02061DNA-directed RNA polymerase II subunit RPB2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpb2 PE=1 SV=2
Q8SR75DNA-directed RNA polymerase II subunit RPB2 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=RPB2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00562RNA_pol_Rpb2_6RNA polymerase Rpb2, domain 6DomainInterproscan
PF04560RNA_pol_Rpb2_7RNA polymerase Rpb2, domain 7DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014724Homologous_superfamilyRNA polymerase Rpb2, OB-foldInterproscan
IPR015712FamilyDNA-directed RNA polymerase, subunit 2Interproscan
IPR007120DomainDNA-directed RNA polymerase, subunit 2, hybrid-binding domainInterproscan
IPR036844Homologous_superfamilyHint domain superfamilyInterproscan
IPR004042DomainIntein DOD homing endonucleaseInterproscan
IPR037033Homologous_superfamilyDNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyInterproscan
IPR027434Homologous_superfamilyHoming endonucleaseInterproscan
IPR007641DomainRNA polymerase Rpb2, domain 7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0032549Molecular Functionribonucleoside bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan

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