Detailed information of HOLI00504.G55339 in Hydra oligactis

Genomic Location: HOLI00504:398297...400921
NR annotation: WP_262127484.1, alanine--tRNA ligase [Pseudomonas sp. 5P_5.1_Bac1]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3K892Alanine--tRNA ligase OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=alaS PE=3 SV=1
Q4K843Alanine--tRNA ligase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=alaS PE=3 SV=1
B1JCG9Alanine--tRNA ligase OS=Pseudomonas putida (strain W619) OX=390235 GN=alaS PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01411tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF02272DHHA1DHHA1 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR023033FamilyAlanine-tRNA ligase, eukaryota/bacteriaInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR018164DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR002318FamilyAlanine-tRNA ligase, class IIcInterproscan
IPR050058FamilyAlanine--tRNA ligaseInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR018162Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan
IPR003156DomainDHHA1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11777ALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01872AARS, alaS; alanyl-tRNA synthetaseEC:6.1.1.7
Transfer RNA biogenesisko03016deepkoala

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