Gene detail

Detailed information of HOLI00522.G17107 in Hydra oligactis

Genomic Location: HOLI00522:408263...409375
NR annotation: WP_031568394.1, alanine--tRNA ligase [Pararheinheimera texasensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A8ANQ1	Alanine--tRNA ligase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=alaS PE=3 SV=1
A4SS99	Alanine--tRNA ligase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=alaS PE=3 SV=1
A0KPG1	Alanine--tRNA ligase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=alaS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02272	DHHA1	DHHA1 domain	Family	Interproscan
PF07973	tRNA_SAD	Threonyl and Alanyl tRNA synthetase second additional domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003156	Domain	DHHA1 domain	Interproscan
IPR012947	Domain	Threonyl/alanyl tRNA synthetase, SAD	Interproscan
IPR018165	Domain	Alanyl-tRNA synthetase, class IIc, core domain	Interproscan
IPR050058	Family	Alanine--tRNA ligase	Interproscan
IPR018163	Homologous_superfamily	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11777	ALANYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0043039	Biological Process	tRNA aminoacylation	Interproscan
GO:0004813	Molecular Function	alanine-tRNA ligase activity	Interproscan
GO:0006419	Biological Process	alanyl-tRNA aminoacylation	Interproscan
GO:0002161	Molecular Function	aminoacyl-tRNA editing activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03590	ftsA; cell division protein FtsA	-	Cytoskeleton proteins	ko04812	deepkoala