Gene detail

Detailed information of HOLI00522.G17108 in Hydra oligactis

Genomic Location: HOLI00522:409449...410758
NR annotation: WP_031568394.1, alanine--tRNA ligase [Pararheinheimera texasensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A4SS99	Alanine--tRNA ligase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=alaS PE=3 SV=1
A0KPG1	Alanine--tRNA ligase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=alaS PE=3 SV=1
Q1I6Z8	Alanine--tRNA ligase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=alaS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01411	tRNA-synt_2c	tRNA synthetases class II (A)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018165	Domain	Alanyl-tRNA synthetase, class IIc, core domain	Interproscan
IPR050058	Family	Alanine--tRNA ligase	Interproscan
IPR018164	Domain	Alanyl-tRNA synthetase, class IIc, N-terminal	Interproscan
IPR023033	Family	Alanine-tRNA ligase, eukaryota/bacteria	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR018162	Homologous_superfamily	Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily	Interproscan
IPR002318	Family	Alanine-tRNA ligase, class IIc	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11777	ALANYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004813	Molecular Function	alanine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006419	Biological Process	alanyl-tRNA aminoacylation	Interproscan
GO:0002161	Molecular Function	aminoacyl-tRNA editing activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan