Gene detail

Detailed information of HOLI00580.G30129 in Hydra oligactis

Genomic Location: HOLI00580:348305...350536
NR annotation: WP_063459996.1, 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein [Acidovorax sp. GW101-3H11]

Gene Structure

More details in Jbrowse

Sequence

CDS

HOLI00580.g30129.t1

ATGTCCCGATTTCAAGTGAAGAAAGTCGCCGTGCTCGGCGCAGGCGTGATGGGCGCGCAGATTGCGGCCCACCTCGTCAACGTGAAGGTGCCCGTGGTGCTGTTCGACCTGCCCGCCAAAGAAGGCCCGAAGAGCGGCATCGTCGACCAAGGCCATCGAAGGCCTCAGGAAGCTCAAGCCCTCGCCCATGGGCGTGGCCGAGGACGCGGCGCTGATCCAGGCAGGCCAACTACGAGGAGCACATGCACGCTGCTCAAGGAATGCGACCTCGTGATCGAGGCCATTGCCGAGCGCATGGACTGGAAGCTCGACCTGTACACCAAGATCGCGCCCCATGTGGCCAAGCACGCCATCCTGGCGTCCAACACCTCGGGCCTGTCGATCACCAAGCTCTCCGAGGTGCTGCCTGAGAGCATCAAGCCGCGTTTCTGCGGCATCCACTTCTTCAACCCGCCGCGCTACATGACGCTGGTGGAGCTGATCAACACCCCCACCACCCAGGCCCGAAGTGCTCGACCAACTCGAAGCCTTCGTCACCAGCGGCCTGGGCAAGGGCGTGGTGCGCGCGCACGACACCCCCAACTTCATGGCCAACCGCATGGGCATCGCCGGCATGCTGGCCACCATGAAGGAGGTCGAGAACTTTGGCCTGACCTACGACGTGGTGGACGACCTCACGGGCAAGAAGCTGGGCCGCGCATCGAGCGGCACCTTCCGCACGGCCGACGTGGTGGGCGCTGGACACCATGGCCCATCTTCGAGCTGGAAAGCGAGGAGTACGTGCCCGCCGGCCAGAAGGCCGACGAGGTGCTATGCCCGCATGCTCAAGAAGCCCGCTGCCGAGCGCCTGAGCCTGCTGCGCCAACGCCGAAGGCGCGCCCGGCCAGTTCCTGTGGGCTATCCTGCGCAACAGCTTCCACTACGCCGCCATGCACCTGGGCACCATCGCGGACAACGGCACGTGATGTGGACCAGGCCATGCGCTGGGGCTTCGGCATGAAGCAGGGCCCCTTCGAGTTGTGGCAGGAAGCGGGCTGGCTCGACGTGGCGAAAATGGTCCAGGAGGACATCGATGCGGGCAAGGCGCTGTGCAAGGGCGCCGCTGCCCGAGTGGGTGTTCGAAGGGCCCTGTGGCCGAAGCTGGTGGCGTGCACACCGCCCAGGGCTCGTGGAGCGCATCGCAAGGCCAATTTGTGCCCCGTCGCCAACTGCCCGTGTACGAGCGCCAGCTCTTCCCCGAGGCCCTGCTGGGCGAAACCAACCTGCCCGACTGGACGCACGGCTGGCACCACCATTGCTGAATCGAAAGCCCTGCGCACCTGGACGCTGGACGGCCAGGTGCTCATCGCCAGCATCAAGAACAAGATGCACGCCATCAGCCCCGAGGTGATGGAGGCGCTGATGGAGGCCTGGAACTGGCCGAGTCTGAGTACCAGGGCATGGTCATCTGGTCTGGCGACGCGCCGTTCAGCGTGGGTGCGGACCTGGAGGCCACCATGCCCGCCTTCATGGTCGGCGGCGCCGATGCCGGTAGAAAGCATCGAGCAGGAGCTGCAAAACCTGATGATGCGCATCCGCTATGCGCAGGTGCCTGTCGTCGCGGCCATCCATGGCATGGCGCTGGGCGGTGGCTGCGAACTGGCCGTGTACTCGGCCAAGCGCGTGGCCCACATGGAAAGCTACATCGGCCTGGTGGAAGTGGGTGTGGGCCTGGTGCCCGGCGCTGGCGGCCTGACCTACATTGCGCCGCCGCGCGGCCGAGAACATGGCCGCCTCTACCAGCAAGGACATCCTGCCCTTCCTGACCGAGGGCTTCACTGCCGCTGCGATGGCCAAGGTAGGCACCAGCGCGATCGAATCGCGCAAGCTGGGCTTCCTGCTGGACAGCGACGTCATCGTGCCGCACAAGGACGAGCTGCTGTTCGTGGCCATCAACGAGGCCAAGTCCATGGCCGCCAGCGGCTGGCGCGCGCCCACAAGCGCCTGTTCCCTGTGGCAGGCCGCAGTGGCATGGCCACCATCAAGGGCACAGCTGGTGAACATGCGCGACGGCGGTTTCATCAGCGCCTATGA

Transcript

HOLI00580.g30129.t1

Protein

Uniprot

Uniprot term	Description
Q4UL32	Putative fatty acid oxidation complex trifunctional enzyme OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=RF_0890 PE=3 SV=1
Q68WH7	Putative fatty acid oxidation complex trifunctional enzyme OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=RT0547 PE=3 SV=1
Q92HC9	Putative uncharacterized protein RC0842 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=RC0842 PE=5 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00378	ECH_1	Enoyl-CoA hydratase/isomerase	Domain	Interproscan
PF02737	3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001753	Family	Enoyl-CoA hydratase/isomerase	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR006176	Domain	3-hydroxyacyl-CoA dehydrogenase, NAD binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48075	3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan