Gene detail

Detailed information of HOLI00580.G30191 in Hydra oligactis

Genomic Location: HOLI00580:415990...417698
NR annotation: MBW8464142.1, RNA 3'-terminal phosphate cyclase [Acidovorax sp.]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
C4ZVX1	RNA 3'-terminal phosphate cyclase OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=rtcA PE=3 SV=1
B1X765	RNA 3'-terminal phosphate cyclase OS=Escherichia coli (strain K12 / DH10B) OX=316385 GN=rtcA PE=3 SV=1
P46849	RNA 3'-terminal phosphate cyclase OS=Escherichia coli (strain K12) OX=83333 GN=rtcA PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05189	RTC_insert	RNA 3'-terminal phosphate cyclase (RTC), insert domain	Domain	Interproscan
PF01137	RTC	RNA 3'-terminal phosphate cyclase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013791	Domain	RNA 3'-terminal phosphate cyclase, insert domain	Interproscan
IPR023797	Domain	RNA 3'-terminal phosphate cyclase domain	Interproscan
IPR013792	Homologous_superfamily	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	Interproscan
IPR000228	Family	RNA 3'-terminal phosphate cyclase	Interproscan
IPR037136	Homologous_superfamily	RNA 3'-terminal phosphate cyclase domain superfamily	Interproscan
IPR036553	Homologous_superfamily	RNA 3'-terminal phosphate cyclase, insert domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11096	RNA 3' TERMINAL PHOSPHATE CYCLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003963	Molecular Function	RNA-3'-phosphate cyclase activity	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01974	RTCA, rtcA; RNA 3'-terminal phosphate cyclase (ATP)	EC:6.5.1.4	Enzymes with EC numbers	-	deepkoala