Detailed information of HOLI00597.G3680 in Hydra oligactis

Genomic Location: HOLI00597:258550...280809
NR annotation: XP_047124501.1, uncharacterized protein LOC105846743 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3
Q7Z443Polycystin-1-like protein 3 OS=Homo sapiens OX=9606 GN=PKD1L3 PE=1 SV=1
Q09624Location of vulva defective 1 OS=Caenorhabditis elegans OX=6239 GN=lov-1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR051223FamilyPolycystinInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP