Gene detail

Detailed information of HOLI00622.G31123 in Hydra oligactis

Genomic Location: HOLI00622:179898...182946
NR annotation: MBU2180544.1, ribonucleoside-diphosphate reductase subunit alpha [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P00452	Ribonucleoside-diphosphate reductase 1 subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=nrdA PE=1 SV=2
P37426	Ribonucleoside-diphosphate reductase 1 subunit alpha OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=nrdA PE=3 SV=1
P57276	Ribonucleoside-diphosphate reductase subunit alpha OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=nrdA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00317	Ribonuc_red_lgN	Ribonucleotide reductase, all-alpha domain	Domain	Interproscan
PF13419	HAD_2	Haloacid dehalogenase-like hydrolase	Family	Interproscan
PF02867	Ribonuc_red_lgC	Ribonucleotide reductase, barrel domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR023198	Homologous_superfamily	Phosphoglycolate phosphatase-like, domain 2	Interproscan
IPR039718	Family	Ribonucleoside-diphosphate reductase large subunit	Interproscan
IPR013509	Domain	Ribonucleotide reductase large subunit, N-terminal	Interproscan
IPR041492	Family	Haloacid dehalogenase-like hydrolase	Interproscan
IPR000788	Domain	Ribonucleotide reductase large subunit, C-terminal	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR008926	Homologous_superfamily	Ribonucleotide reductase R1 subunit, N-terminal	Interproscan
IPR006439	Family	HAD hydrolase, subfamily IA	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11573	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004748	Molecular Function	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005971	Cellular Component	ribonucleoside-diphosphate reductase complex	Interproscan
GO:0009263	Biological Process	deoxyribonucleotide biosynthetic process	Interproscan