Gene detail

Detailed information of HOLI00622.G31333 in Hydra oligactis

Genomic Location: HOLI00622:365847...366636
NR annotation: TXH96391.1, TIGR01621 family pseudouridine synthase [Rheinheimera sp.]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P43930	Uncharacterized RNA pseudouridine synthase HI_0042 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0042 PE=3 SV=1
Q8ZFU1	Ribosomal large subunit pseudouridine synthase C OS=Yersinia pestis OX=632 GN=rluC PE=3 SV=1
P0AA37	Dual-specificity RNA pseudouridine synthase RluA OS=Escherichia coli (strain K12) OX=83333 GN=rluA PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00849	PseudoU_synth_2	RNA pseudouridylate synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050188	Family	RluA Pseudouridine Synthase	Interproscan
IPR020103	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan
IPR006224	Conserved_site	Pseudouridine synthase, RluA-like, conserved site	Interproscan
IPR006145	Domain	Pseudouridine synthase, RsuA/RluA-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21600	MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000455	Biological Process	enzyme-directed rRNA pseudouridine synthesis	Interproscan
GO:0009982	Molecular Function	pseudouridine synthase activity	Interproscan
GO:0001522	Biological Process	pseudouridine synthesis	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0009451	Biological Process	RNA modification	Interproscan