Detailed information of HOLI00644.G54411 in Hydra oligactis

Genomic Location: HOLI00644:132946...194772
NR annotation: XP_047124124.1, putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O43143ATP-dependent RNA helicase DHX15 OS=Homo sapiens OX=9606 GN=DHX15 PE=1 SV=2
O35286ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=2
Q5RAZ4ATP-dependent RNA helicase DHX15 OS=Pongo abelii OX=9601 GN=DHX15 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan
PF01595CNNMCyclin M transmembrane N-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002550DomainCNNM, transmembrane domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR046342Homologous_superfamilyCBS domain superfamilyInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR044751DomainIon transporter-like, CBS domainInterproscan
IPR000644DomainCBS domainInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR044756DomainDHX15, DEXH-box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan

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