Genomic Location: HOLI00655:52785...54185
NR annotation: WP_105259604.1, oxygen-independent coproporphyrinogen III oxidase [Rhodoferax sp. TS-BS-61-7]
| CDS | ||||
| HOLI00655.g56712.t1 | ||||
| Transcript |
| HOLI00655.g56712.t1 |
| Protein |
| HOLI00655.G56712 |
| Uniprot term | Description |
|---|---|
| O34162 | Oxygen-independent coproporphyrinogen III oxidase OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=hemN PE=2 SV=2 |
| P77915 | Oxygen-independent coproporphyrinogen III oxidase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=hemN PE=2 SV=2 |
| P32131 | Oxygen-independent coproporphyrinogen III oxidase OS=Escherichia coli (strain K12) OX=83333 GN=hemN PE=1 SV=4 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04055 | Radical_SAM | Radical SAM superfamily | Domain | Interproscan |
| PF06969 | HemN_C | HemN C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023404 | Homologous_superfamily | Radical SAM, alpha/beta horseshoe | Interproscan |
| IPR007197 | Domain | Radical SAM | Interproscan |
| IPR010723 | Domain | HemN, C-terminal | Interproscan |
| IPR004558 | Family | Oxygen-independent coproporphyrinogen III oxidase HemN | Interproscan |
| IPR034505 | Family | Anaerobic coproporphyrinogen-III oxidase | Interproscan |
| IPR006638 | Domain | Elp3/MiaA/NifB-like, radical SAM core domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13932 | COPROPORPHYRINIGEN III OXIDASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0051536 | Molecular Function | iron-sulfur cluster binding | Interproscan |
| GO:0004109 | Molecular Function | coproporphyrinogen oxidase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006779 | Biological Process | porphyrin-containing compound biosynthetic process | Interproscan |
| GO:0006782 | Biological Process | protoporphyrinogen IX biosynthetic process | Interproscan |
| GO:0051539 | Molecular Function | 4 iron, 4 sulfur cluster binding | Interproscan |
| GO:0051989 | Molecular Function | coproporphyrinogen dehydrogenase activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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